i would like to know if there is a way to “trick” the dendrogram function fig = ff.create_dendrogram(data_array, orientation=‘bottom’, labels=labels) to be able to use it with a newick tree?
i created this file with a AAI matrix (similarity of amino acid) between my genomes and used clustering with ff.create_dendrogram.
i would like to create the same kind of plot but without any clustering, “just” to follow the clustering of the phylogenetic tree to see if the clustering in consistent with the phylogeny.
i used the code from here :https://plotly.com/python/dendrogram/
i can share my files if needed